Detailed information of matrix profile MA0039.3

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Profile summary
Name: KLF4
Matrix ID: MA0039.3
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 18555785
Uniprot ID: O43474  
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 262 117 924 8 830 13 29 15 259 184 230 ]
C [ 481 648 14 948 2 914 909 933 72 279 295 ]
G [ 126 105 18 6 123 18 17 4 39 283 202 ]
T [ 100 99 13 7 14 24 14 17 599 223 242 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0039.1 MA0039 1 Klf4 Mus musculus
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0039.2 MA0039 2 Klf4 Mus musculus
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0039.3 MA0039 3 KLF4 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0039.4 MA0039 4 KLF4 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0056.2

ChIP-seq Centrality
log(P-value): -5156.48

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0056.2

ChIP-seq Centrality
log(P-value): -4795.18

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: