Detailed information of matrix profile MA0039.2

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Profile summary
Name: Klf4
Matrix ID: MA0039.2
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 18555785
Uniprot ID: Q60793  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 1468 88 14 14 277 22 42 264 123 254 ]
C [ 81 9 13 36 1922 15 80 46 130 2858 ]
G [ 1022 4237 4304 4281 11 4273 2179 3902 3789 280 ]
T [ 1765 6 13 16 2139 34 2042 125 289 932 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0039.1 MA0039 1 Klf4 Mus musculus
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0039.2 MA0039 2 Klf4 Mus musculus
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0039.3 MA0039 3 KLF4 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0039.4 MA0039 4 KLF4 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0056.1

ChIP-seq Centrality
log(P-value): -3451.72

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0056.1

ChIP-seq Centrality
log(P-value): -3445.53

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: