Detailed information of matrix profile UN0462.1

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Profile summary

Name: Pax2-5-8-a
Matrix ID: UN0462.1
Class: Paired box factors
Family: Paired domain only
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2Z3  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 176 426 226 118 167 557 414 56 17 113 27 178 867 90 50 182 246 165 296 342 211 150 ]
C [ 419 219 227 232 327 77 182 188 916 10 28 161 27 861 126 285 178 294 324 267 273 296 ]
G [ 148 225 346 150 331 247 123 704 20 818 47 570 56 12 749 376 201 133 199 224 271 321 ]
T [ 257 130 201 499 175 119 281 52 47 58 898 91 50 37 75 157 375 408 182 167 245 234 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0462.1 UN0462 1 Pax2-5-8-a Ciona intestinalis
Paired domain only Paired box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: