Detailed information of matrix profile UN0462.1

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Profile summary

Name: Pax2-5-8-a
Matrix ID: UN0462.1
Class: Paired box factors
Family: Paired domain only
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2Z3  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 234 245 167 182 408 375 157 75 37 50 91 898 58 47 52 281 119 175 499 201 130 257 ]
C [ 321 271 224 199 133 201 376 749 12 56 570 47 818 20 704 123 247 331 150 346 225 148 ]
G [ 296 273 267 324 294 178 285 126 861 27 161 28 10 916 188 182 77 327 232 227 219 419 ]
T [ 150 211 342 296 165 246 182 50 90 867 178 27 113 17 56 414 557 167 118 226 426 176 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0462.1 UN0462 1 Pax2-5-8-a Ciona intestinalis
Paired domain only Paired box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: