Detailed information of matrix profile UN0453.1

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Profile summary

Name: HNF4
Matrix ID: UN0453.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H3D5  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 152 305 503 196 194 167 23 15 214 811 8 9 24 32 59 358 454 56 53 99 195 240 ]
C [ 120 116 242 532 138 81 117 8 19 167 976 58 58 39 57 126 374 796 454 407 189 229 ]
G [ 585 460 138 140 147 192 18 959 740 12 7 10 25 29 815 384 81 66 62 132 183 280 ]
T [ 143 119 118 133 521 561 842 19 26 11 9 923 893 899 69 131 90 82 432 363 433 251 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0453.1 UN0453 1 HNF4 Ciona intestinalis
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: