Detailed information of matrix profile UN0453.1

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Profile summary

Name: HNF4
Matrix ID: UN0453.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H3D5  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 251 433 363 432 82 90 131 69 899 893 923 9 11 26 19 842 561 521 133 118 119 143 ]
C [ 280 183 132 62 66 81 384 815 29 25 10 7 12 740 959 18 192 147 140 138 460 585 ]
G [ 229 189 407 454 796 374 126 57 39 58 58 976 167 19 8 117 81 138 532 242 116 120 ]
T [ 240 195 99 53 56 454 358 59 32 24 9 8 811 214 15 23 167 194 196 503 305 152 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0453.1 UN0453 1 HNF4 Ciona intestinalis
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: