Detailed information of matrix profile UN0444.1

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Profile summary

Name: Cdx
Matrix ID: UN0444.1
Class: Homeo domain factors
Family: HOX
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H3T1  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 277 279 286 264 267 285 284 92 90 131 966 37 93 201 85 218 203 218 281 282 288 298 ]
C [ 195 197 202 207 213 198 145 27 16 13 6 42 19 20 600 244 231 199 181 174 167 161 ]
G [ 218 225 228 239 233 257 231 47 19 28 13 26 230 740 148 279 298 269 255 249 250 262 ]
T [ 310 299 285 290 287 259 340 834 876 828 15 894 658 39 167 260 268 313 282 295 295 279 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0444.1 UN0444 1 Cdx Ciona intestinalis
HOX Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: