Detailed information of matrix profile UN0444.1

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Profile summary

Name: Cdx
Matrix ID: UN0444.1
Class: Homeo domain factors
Family: HOX
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H3T1  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 279 295 295 282 313 268 260 167 39 658 894 15 828 876 834 340 259 287 290 285 299 310 ]
C [ 262 250 249 255 269 298 279 148 740 230 26 13 28 19 47 231 257 233 239 228 225 218 ]
G [ 161 167 174 181 199 231 244 600 20 19 42 6 13 16 27 145 198 213 207 202 197 195 ]
T [ 298 288 282 281 218 203 218 85 201 93 37 966 131 90 92 284 285 267 264 286 279 277 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0444.1 UN0444 1 Cdx Ciona intestinalis
HOX Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: