Detailed information of matrix profile UN0412.1

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Profile summary

Name: VFP5
Matrix ID: UN0412.1
Class: Tryptophan cluster factors
Family: Trihelix
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: F4K0Q7  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 302 131 362 101 2 168 42 0 0 0 634 388 614 378 322 ]
C [ 208 435 119 193 911 0 757 1000 0 0 206 5 76 164 119 ]
G [ 102 126 357 45 29 832 114 0 1000 998 15 596 104 136 255 ]
T [ 388 309 161 661 59 0 87 0 0 2 144 12 206 322 304 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0412.1 UN0412 1 VFP5 Arabidopsis thaliana
Trihelix Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: