Detailed information of matrix profile UN0402.1

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Profile summary

Name: IDD11
Matrix ID: UN0402.1
Class: C2H2 zinc finger factors
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9LRW7  
Source: 27203113
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 285 621 210 680 846 641 915 209 7 991 0 1000 959 885 682 448 482 369 ]
C [ 371 87 332 12 2 70 39 682 0 9 1000 0 12 31 70 144 116 152 ]
G [ 113 209 323 72 2 142 41 75 990 0 0 0 24 63 77 118 109 227 ]
T [ 231 84 135 236 150 147 5 34 3 0 0 0 5 21 171 291 292 251 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0402.1 UN0402 1 IDD11 Arabidopsis thaliana
C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: