Detailed information of matrix profile UN0402.1

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Profile summary

Name: IDD11
Matrix ID: UN0402.1
Class: C2H2 zinc finger factors
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9LRW7  
Source: 27203113
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 251 292 291 171 21 5 0 0 0 3 34 5 147 150 236 135 84 231 ]
C [ 227 109 118 77 63 24 0 0 0 990 75 41 142 2 72 323 209 113 ]
G [ 152 116 144 70 31 12 0 1000 9 0 682 39 70 2 12 332 87 371 ]
T [ 369 482 448 682 885 959 1000 0 991 7 209 915 641 846 680 210 621 285 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0402.1 UN0402 1 IDD11 Arabidopsis thaliana
C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: