Detailed information of matrix profile MA0105.2

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Profile summary
Name: NFKB1
Matrix ID: MA0105.2
Class: Rel homology region (RHR) factors
Family: NF-kappaB-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SELEX
Validation: 1406630
Uniprot ID: P19838  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 0 0 0 2 11 5 0 0 0 0 1 ]
C [ 0 0 0 0 1 0 5 13 17 18 15 ]
G [ 18 18 18 16 6 2 2 0 0 0 1 ]
T [ 0 0 0 0 0 11 11 5 1 0 1 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0105.1 MA0105 1 NFKB1 Homo sapiens
Oryctolagus cuniculus
Mus musculus
Rattus norvegicus
NF-kappaB-related factors Rel homology region (RHR) factors
MA0105.2 MA0105 2 NFKB1 Homo sapiens
NF-kappaB-related factors Rel homology region (RHR) factors
MA0105.3 MA0105 3 NFKB1 Homo sapiens
NF-kappaB-related factors Rel homology region (RHR) factors
MA0105.4 MA0105 4 NFKB1 Homo sapiens
NF-kappaB-related factors Rel homology region (RHR) factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description: nuclear factor of kappa light polypeptide gene enhancer in B-cells 1

Alias: KBF1,p105,NFKB-p50,p50,NF-kappaB,NFkappaB,NF-kB1

Symbol: NFKB1

Consensus:

Included Models:

GC Content: