Detailed information of matrix profile MA0080.6

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Profile summary
Name: Spi1
Matrix ID: MA0080.6
Class: Tryptophan cluster factors
Family: Ets-related
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 7624145
Uniprot ID: P17433  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 24555 20566 12758 5766 79357 1375 2889 1028 956 1211 3016 4375 11187 6546 8997 16147 20568 ]
C [ 26211 27873 57669 83385 5128 89140 1822 1063 101383 99360 9636 79986 10220 10614 22807 36629 27663 ]
G [ 17063 17433 11577 6075 3716 7067 958 1095 831 550 2594 12201 2330 5758 6863 14901 15468 ]
T [ 37369 39326 23194 9972 16997 7616 99529 102012 2028 4077 89952 8636 81461 82280 66531 37521 41499 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0080.1 MA0080 1 SPI1 Homo sapiens
Ets-related Tryptophan cluster factors
MA0080.2 MA0080 2 SPI1 Homo sapiens
Ets-related Tryptophan cluster factors
MA0080.3 MA0080 3 Spi1 Mus musculus
Ets-related Tryptophan cluster factors
MA0080.4 MA0080 4 SPI1 Homo sapiens
Ets-related Tryptophan cluster factors
MA0080.5 MA0080 5 SPI1 Homo sapiens
Ets-related Tryptophan cluster factors
MA0080.6 MA0080 6 Spi1 Mus musculus
Ets-related Tryptophan cluster factors
     

log(P-value) = 2576.09

TFFM details

TFFM ID: TFFM0713.1

ChIP-seq Centrality
log(P-value): -99945.8

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0713.1

ChIP-seq Centrality
log(P-value): -97409.0

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: