Detailed information of matrix profile MA0080.6

  1. Home
  2. Matrix > MA0080.6

Profile summary
Name: Spi1
Matrix ID: MA0080.6
Class: Tryptophan cluster factors
Family: Ets-related
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 7624145
Uniprot ID: P17433  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 41499 37521 66531 82280 81461 8636 89952 4077 2028 102012 99529 7616 16997 9972 23194 39326 37369 ]
C [ 15468 14901 6863 5758 2330 12201 2594 550 831 1095 958 7067 3716 6075 11577 17433 17063 ]
G [ 27663 36629 22807 10614 10220 79986 9636 99360 101383 1063 1822 89140 5128 83385 57669 27873 26211 ]
T [ 20568 16147 8997 6546 11187 4375 3016 1211 956 1028 2889 1375 79357 5766 12758 20566 24555 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0080.1 MA0080 1 SPI1 Homo sapiens
Ets-related Tryptophan cluster factors
MA0080.2 MA0080 2 SPI1 Homo sapiens
Ets-related Tryptophan cluster factors
MA0080.3 MA0080 3 Spi1 Mus musculus
Ets-related Tryptophan cluster factors
MA0080.4 MA0080 4 SPI1 Homo sapiens
Ets-related Tryptophan cluster factors
MA0080.5 MA0080 5 SPI1 Homo sapiens
Ets-related Tryptophan cluster factors
MA0080.6 MA0080 6 Spi1 Mus musculus
Ets-related Tryptophan cluster factors
     

log(P-value) = 2576.09

TFFM details

TFFM ID: TFFM0713.1

ChIP-seq Centrality
log(P-value): -99945.8

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0713.1

ChIP-seq Centrality
log(P-value): -97409.0

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: