JASPAR CORE

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Total 2430 profiles

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ID Name Species Class Family Sequence logo
MA0024.1 E2F1 Homo sapiens Fork head/winged helix factors E2F
MA0024.2 E2F1 Homo sapiens Fork head/winged helix factors E2F
MA0024.3 E2F1 Homo sapiens Fork head/winged helix factors E2F
MA0025.1 NFIL3 Homo sapiens Basic leucine zipper factors (bZIP) CEBP-related
MA0025.2 NFIL3 Homo sapiens Basic leucine zipper factors (bZIP) CEBP-related
MA0026.1 Eip74EF Drosophila melanogaster Tryptophan cluster factors Ets-related
MA0027.1 En1 Mus musculus Homeo domain factors NK
MA0027.2 EN1 Homo sapiens Homeo domain factors NK
MA0028.1 ELK1 Homo sapiens Tryptophan cluster factors Ets-related
MA0028.2 ELK1 Homo sapiens Tryptophan cluster factors Ets-related
Showing 10 profiles of page 5 from 243 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.