Detailed information of matrix profile UN0464.1

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Profile summary

Name: Pax6
Matrix ID: UN0464.1
Class: Paired box factors
Family: Paired plus homeo domain
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2Y8  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 292 314 257 222 238 335 375 70 33 873 923 48 35 387 315 235 181 286 325 286 ]
C [ 174 184 235 239 216 221 191 108 57 51 23 27 66 158 208 220 291 209 182 198 ]
G [ 236 254 202 220 231 279 255 82 26 57 30 29 88 271 321 277 213 223 211 235 ]
T [ 298 248 307 318 315 164 179 741 884 20 24 896 811 185 156 267 315 282 282 281 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0464.1 UN0464 1 Pax6 Ciona intestinalis
Paired plus homeo domain Paired box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: