Detailed information of matrix profile UN0463.1

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Profile summary

Name: Pax3-7-like
Matrix ID: UN0463.1
Class: Paired box factors
Family: Paired plus homeo domain
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2Y9  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 295 303 334 319 289 276 479 930 43 52 794 883 36 168 420 303 246 251 279 283 ]
C [ 221 219 226 220 212 181 158 21 49 749 57 29 26 211 151 209 227 217 221 225 ]
G [ 217 212 206 219 202 153 202 21 32 53 118 40 23 165 174 209 214 218 213 212 ]
T [ 266 267 234 242 298 390 161 29 876 146 31 48 915 456 255 279 313 314 286 280 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0463.1 UN0463 1 Pax3-7-like Ciona intestinalis
Paired plus homeo domain Paired box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: