Detailed information of matrix profile UN0455.1

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Profile summary

Name: Meis
Matrix ID: UN0455.1
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H374  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 250 265 283 291 300 253 249 46 13 808 16 912 107 201 189 234 223 242 257 260 ]
C [ 233 249 252 235 213 245 238 39 16 25 949 11 115 288 257 232 234 271 274 263 ]
G [ 268 252 237 247 265 255 230 34 962 50 10 47 662 305 189 260 273 240 224 234 ]
T [ 248 234 227 226 221 248 283 880 10 118 25 29 115 206 365 273 269 247 245 242 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0455.1 UN0455 1 Meis Ciona intestinalis
TALE-type homeo domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: