Detailed information of matrix profile UN0244.1

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Profile summary

Name: ZSCAN16
Matrix ID: UN0244.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q9H4T2  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 24930 4 50279 3 5 1 1 1 493 4 141 22 50276 50287 7 49240 7524 2389 3664 ]
C [ 8013 77 3 0 4 50287 8 50276 7 0 2 2806 0 0 50282 26 30730 4733 10456 ]
G [ 4109 50228 1173 50287 50281 2 3 2 29 50286 6 0 17 4 0 1139 4647 370 9213 ]
T [ 13238 1 3 1168 4 9 50284 18 49888 7 50207 47911 2 3 4 33 7390 43086 26957 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0244.1 UN0244 1 ZSCAN16 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: