Detailed information of matrix profile MA2040.1

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Profile summary
Name: AT5G05550
Matrix ID: MA2040.1
Class: Tryptophan cluster factors
Family: Trihelix
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 25215497
Uniprot ID: F4K0Q7  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 506 683 299 65 191 57 4 8 15 1797 351 1099 710 ]
C [ 796 377 428 2037 10 2017 2281 0 15 328 43 327 463 ]
G [ 289 641 208 68 2038 119 0 2283 2244 13 1863 390 280 ]
T [ 707 597 1363 128 59 105 13 7 24 160 41 482 845 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2040.1 MA2040 1 AT5G05550 Arabidopsis thaliana
Trihelix Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0987.1

ChIP-seq Centrality
log(P-value): -804.167

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0987.1

ChIP-seq Centrality
log(P-value): -773.211

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: