Detailed information of matrix profile MA2023.1

  1. Home
  2. Matrix > MA2023.1

Profile summary
Name: PHL4
Matrix ID: MA2023.1
Class: Tryptophan cluster factors
Family: GARP_G2-like
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 30327661
Uniprot ID: Q8GXC2  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 65 90 72 75 1 154 187 1 184 1 16 4 7 49 42 56 51 ]
C [ 37 22 39 32 1 16 0 0 2 1 3 183 114 28 29 32 39 ]
G [ 40 29 32 75 180 5 0 0 1 0 12 0 27 33 21 34 42 ]
T [ 45 46 44 5 5 12 0 186 0 185 156 0 39 77 95 65 55 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2023.1 MA2023 1 PHL4 Arabidopsis thaliana
GARP_G2-like Tryptophan cluster factors
     

log(P-value) = 121.798

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: