Detailed information of matrix profile MA1741.1

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Profile summary
Name: BRN2
Matrix ID: MA1741.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 20935069
Uniprot ID: Q9SV87  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 199 416 453 74 0 0 413 333 430 338 259 309 55 995 731 3 ]
C [ 0 7 32 925 0 0 48 182 140 166 212 107 537 5 269 0 ]
G [ 8 135 465 0 699 2 532 154 261 176 72 194 209 0 0 960 ]
T [ 793 441 50 2 301 998 7 331 169 321 457 390 199 0 0 37 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1741.1 MA1741 1 BRN2 Arabidopsis thaliana
NAC GCM domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: