Detailed information of matrix profile MA1678.2

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Profile summary
Name: NTL8
Matrix ID: MA1678.2
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 24914054 24914054
Uniprot ID: Q9XIN7  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 303 406 198 47 23 18 73 12 16 9 78 397 264 ]
C [ 154 142 96 40 16 3 35 956 42 10 669 175 197 ]
G [ 201 189 468 850 10 4 79 6 12 5 171 165 197 ]
T [ 324 245 220 45 933 957 795 8 912 958 64 245 324 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1678.1 MA1678 1 NTL8 Arabidopsis thaliana
NAC GCM domain factors
MA1678.2 MA1678 2 NTL8 Arabidopsis thaliana
NAC GCM domain factors
     

log(P-value) = 372.105

TFFM details

TFFM ID: TFFM0906.1

ChIP-seq Centrality
log(P-value): -1243.89

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0906.1

ChIP-seq Centrality
log(P-value): -1200.5

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: