Detailed information of matrix profile MA0965.2

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Profile summary
Name: BIM2
Matrix ID: MA0965.2
Class: Basic helix-loop-helix factors (bHLH)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 15680330
Uniprot ID: Q9CAA4  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 3108 3237 3380 2358 2201 28 10093 14 165 85 36 3007 1994 3238 2805 2885 ]
C [ 2174 2010 1964 1874 1899 10294 36 10179 23 166 20 3272 4148 1799 2323 2211 ]
G [ 2214 2323 1796 4150 3275 20 165 23 10174 36 10294 1902 1874 1958 2012 2178 ]
T [ 2882 2808 3238 1996 3003 36 84 162 16 10091 28 2197 2362 3383 3238 3104 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0965.1 MA0965 1 BIM2 Arabidopsis thaliana
Basic helix-loop-helix factors (bHLH)
MA0965.2 MA0965 2 BIM2 Arabidopsis thaliana
Basic helix-loop-helix factors (bHLH)
     

log(P-value) = 7212.57

TFFM details

TFFM ID: TFFM0812.1

ChIP-seq Centrality
log(P-value): -7835.64

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0812.1

ChIP-seq Centrality
log(P-value): -7923.56

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: