Detailed information of matrix profile MA0538.1

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Profile summary
Name: daf-12
Matrix ID: MA0538.1
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 15375261
Uniprot ID: G5EFF5  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 22 71 33 23 0 0 0 15 0 1 0 0 32 17 17 ]
C [ 20 0 0 52 0 52 0 25 20 0 1 79 0 20 43 ]
G [ 113 13 123 6 156 0 156 14 97 0 154 16 84 28 56 ]
T [ 1 72 0 75 0 104 0 102 39 155 1 61 40 91 40 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0538.1 MA0538 1 daf-12 Caenorhabditis elegans
C4-GATA-related Other C4 zinc finger-type factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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GC Content: