Detailed information of matrix profile MA0537.1

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Profile summary
Name: blmp-1
Matrix ID: MA0537.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 20421211
Uniprot ID: Q93560  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 1909 3092 2926 3216 842 1157 0 3368 2129 3081 1745 ]
C [ 0 0 0 0 0 335 0 0 0 0 128 ]
G [ 1459 266 442 152 2060 548 3368 0 1086 254 1383 ]
T [ 0 10 0 0 466 1328 0 0 153 33 112 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0537.1 MA0537 1 blmp-1 Caenorhabditis elegans
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0451.1

ChIP-seq Centrality
log(P-value): -217.856

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0451.1

ChIP-seq Centrality
log(P-value): -175.41

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: