Detailed information of matrix profile MA0263.1

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Profile summary
Name: ceh-10::ttx-3
Matrix ID: MA0263.1
Class: Homeo domain factors::Homeo domain factors
Family: Paired-related HD factors::HD-LIM factors
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: EMSA
Validation: 15177025
Uniprot ID: G5EE86   P41935  
Source:
Comment: dimer

Sequence logo

Frequency matrix

         
A [ 28 0 1 9 0 2 3 1 14 4 0 0 24 15 ]
C [ 0 0 0 0 0 16 5 5 15 3 0 2 1 0 ]
G [ 1 1 0 20 28 1 1 0 0 22 0 0 0 9 ]
T [ 0 28 28 0 1 10 20 23 0 0 29 27 4 5 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0263.1 MA0263 1 ceh-10::ttx-3 Caenorhabditis elegans
Paired-related HD factors::HD-LIM factors Homeo domain factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: