Detailed information of matrix profile MA0122.2

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Profile summary
Name: NKX3-2
Matrix ID: MA0122.2
Class: Homeo domain factors
Family: NK
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585360
Uniprot ID: P78367  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 1876 761 5712 5712 27 272 488 615 867 ]
C [ 2456 173 0 25 26 49 18 2832 1611 ]
G [ 1339 357 197 36 5712 105 5712 5712 1032 ]
T [ 5712 5712 26 5 170 5712 21 1715 2202 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0122.1 MA0122 1 Nkx3-2 Mus musculus
NK Homeo domain factors
MA0122.2 MA0122 2 NKX3-2 Homo sapiens
NK Homeo domain factors
MA0122.3 MA0122 3 Nkx3-2 Mus musculus
NK Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: