Detailed information of matrix profile MA0050.3

  1. Home
  2. Matrix > MA0050.3

Profile summary
Name: Irf1
Matrix ID: MA0050.3
Class: Tryptophan cluster factors
Family: Interferon-regulatory factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 21803131
Uniprot ID: P15314  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 6079 1931 496 364 422 296 12533 564 346 334 483 660 8589 3358 3277 ]
C [ 1922 5999 607 499 775 14013 274 3315 240 258 1024 12682 2035 3840 2199 ]
G [ 4087 5050 365 353 298 314 933 9822 176 253 361 637 1292 3931 2111 ]
T [ 3552 2660 14172 14424 14145 1017 1900 1939 14878 14795 13772 1661 3724 4511 8053 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0050.1 MA0050 1 IRF1 Homo sapiens
Interferon-regulatory factors Tryptophan cluster factors
MA0050.2 MA0050 2 IRF1 Homo sapiens
Interferon-regulatory factors Tryptophan cluster factors
MA0050.3 MA0050 3 Irf1 Mus musculus
Interferon-regulatory factors Tryptophan cluster factors
     

log(P-value) = 132.903

TFFM details

TFFM ID: TFFM0708.1

ChIP-seq Centrality
log(P-value): -2249.17

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0708.1

ChIP-seq Centrality
log(P-value): -2420.1

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: