Detailed information of matrix profile MA0014.2

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Profile summary
Name: PAX5
Matrix ID: MA0014.2
Class: Paired box factors
Family: Paired domain only
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 8406007
Uniprot ID: Q02548  
Source: ENCODE
Comment:

Sequence logo

Frequency matrix

         
A [ 261 315 308 245 0 39 766 152 9 174 542 537 0 3 317 153 225 587 152 ]
C [ 228 59 30 148 169 736 21 163 538 419 8 17 215 751 17 41 6 33 667 ]
G [ 333 222 546 336 455 0 83 533 35 294 344 185 679 17 540 155 659 222 25 ]
T [ 74 300 12 167 272 121 26 48 314 9 2 157 2 125 22 547 6 54 52 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0014.1 MA0014 1 Pax5 Mus musculus
Paired domain only Paired box factors
MA0014.2 MA0014 2 PAX5 Homo sapiens
Paired domain only Paired box factors
MA0014.3 MA0014 3 PAX5 Homo sapiens
Paired domain only Paired box factors
     

log(P-value) = -576

TFFM details

TFFM ID: TFFM0084.1

ChIP-seq Centrality
log(P-value): -5742.02

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0084.1

ChIP-seq Centrality
log(P-value): -5622.64

TFFM detailed summary logos

Description: paired box 5

Alias: BSAP

Symbol: PAX5

Consensus:

Included Models:

GC Content: