Detailed information of matrix profile MA0009.1

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Profile summary
Name: Tbxt
Matrix ID: MA0009.1
Class: T-Box factors
Family: Brachyury-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: SELEX
Validation: 8344258
Uniprot ID: P20293  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 4 0 4 38 0 40 0 0 0 38 2 ]
C [ 0 0 28 0 40 0 40 40 0 0 8 ]
G [ 5 0 7 2 0 0 0 0 0 1 28 ]
T [ 31 40 1 0 0 0 0 0 40 1 2 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0009.1 MA0009 1 Tbxt Mus musculus
Brachyury-related factors T-Box factors
MA0009.2 MA0009 2 TBXT Homo sapiens
Brachyury-related factors T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description: T,brachyury homolog (mouse)

Alias: -

Symbol: T

Consensus:

Included Models:

GC Content: