JASPAR CORE

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Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0682.1 Pitx1 Mus musculus Homeo domain factors Paired-related HD factors
MA0682.2 PITX1 Homo sapiens Homeo domain factors Paired-related HD factors
MA0683.1 POU4F2 Homo sapiens Homeo domain factors POU domain factors
MA0684.1 RUNX3 Homo sapiens Runt domain factors Runt-related factors
MA0684.2 RUNX3 Homo sapiens Runt domain factors Runt-related factors
MA0685.1 SP4 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA0685.2 SP4 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA0686.1 SPDEF Homo sapiens Tryptophan cluster factors Ets-related
MA0687.1 SPIC Homo sapiens Tryptophan cluster factors Ets-related
MA0688.1 TBX2 Homo sapiens T-Box factors TBX2-related factors
Showing 10 profiles of page 95 from 243 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.