JASPAR CORE

Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1922.1 Tbx2/3 Ciona intestinalis T-Box factors TBX2-related factors
MA1923.1 Tcf3-4-12 Ciona intestinalis Basic helix-loop-helix factors (bHLH) E2A
MA1924.1 Tlx Ciona intestinalis Homeo domain factors NK
MA1925.1 Uncx-b Ciona intestinalis Homeo domain factors Paired-related HD factors
MA1926.1 Usf Ciona intestinalis Basic helix-loop-helix factors (bHLH) bHLH-ZIP
MA1927.1 YY1-2 Ciona intestinalis C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1928.1 BNC2 Homo sapiens C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
MA1929.1 CTCF Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1930.1 CTCF Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
MA1931.1 ELK1::HOXA1 Homo sapiens Tryptophan cluster factors::Homeo domain factors Ets-related::HOX-related factors
MA1932.1 ELK1::HOXB13 Homo sapiens Tryptophan cluster factors::Homeo domain factors Ets-related::HOX-related factors
MA1933.1 ELK1::SREBF2 Homo sapiens Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH) Ets-related::bHLH-ZIP
MA1934.1 ERF::FIGLA Homo sapiens Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH) Ets-related::Tal-related
MA1935.1 ERF::FOXI1 Homo sapiens Tryptophan cluster factors::Fork head/winged helix factors Ets-related::FOX
MA1936.1 ERF::FOXO1 Homo sapiens Tryptophan cluster factors::Fork head/winged helix factors Ets-related::FOX
MA1937.1 ERF::HOXB13 Homo sapiens Tryptophan cluster factors::Homeo domain factors Ets-related::HOX-related factors
MA1938.1 ERF::NHLH1 Homo sapiens Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH) Ets-related::Tal-related
MA1939.1 ERF::SREBF2 Homo sapiens Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH) Ets-related::bHLH-ZIP
MA1940.1 ETV2::DRGX Homo sapiens Tryptophan cluster factors::Homeo domain factors Ets-related::Paired-related HD factors
MA1941.1 ETV2::FIGLA Homo sapiens Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH) Ets-related::Tal-related
MA1942.1 ETV2::FOXI1 Homo sapiens Tryptophan cluster factors::Fork head/winged helix factors Ets-related::FOX
MA1943.1 ETV2::HOXB13 Homo sapiens Tryptophan cluster factors::Homeo domain factors Ets-related::HOX-related factors
MA1944.1 ETV5::DRGX Homo sapiens Tryptophan cluster factors::Homeo domain factors Ets-related::Paired-related HD factors
MA1945.1 ETV5::FIGLA Homo sapiens Tryptophan cluster factors::Basic helix-loop-helix factors (bHLH) Ets-related::Tal-related
MA1946.1 ETV5::FOXI1 Homo sapiens Tryptophan cluster factors::Fork head/winged helix factors Ets-related::FOX
Showing 25 profiles of page 93 from 98 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.