JASPAR CORE

Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0550.1 BZR1 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH) BES/BZR
MA0550.2 BZR1 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH) BES/BZR
MA0551.1 HY5 Arabidopsis thaliana Basic leucine zipper factors (bZIP) Group H
MA0552.1 PIF1 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH)
MA0553.1 SMZ Arabidopsis thaliana AP2/EREBP AP2
MA0554.1 SOC1 Arabidopsis thaliana MADS box factors MIKC
MA0555.1 SVP Arabidopsis thaliana MADS box factors MIKC
MA0556.1 AP3 Arabidopsis thaliana MADS box factors MIKC
MA0557.1 FHY3 Arabidopsis thaliana GCM domain factors WRKY-like_FRS/FRF
MA0558.1 FLC Arabidopsis thaliana MADS box factors MIKC
Showing 10 profiles of page 78 from 243 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.