JASPAR CORE

  1. Home
  2. Collection core

Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1493.1 HES6 Homo sapiens Basic helix-loop-helix factors (bHLH) Hairy-related factors
MA1494.1 HNF4A Homo sapiens Nuclear receptors with C4 zinc fingers RXR-related receptors (NR2)
MA1495.1 HOXA1 Homo sapiens Homeo domain factors HOX
MA1496.1 HOXA4 Homo sapiens Homeo domain factors HOX
MA1497.1 HOXA6 Homo sapiens Homeo domain factors HOX
MA1498.1 HOXA7 Homo sapiens Homeo domain factors HOX
MA1498.2 HOXA7 Homo sapiens Homeo domain factors HOX
MA1499.1 HOXB4 Homo sapiens Homeo domain factors HOX
MA1500.1 HOXB6 Homo sapiens Homeo domain factors HOX
MA1501.1 HOXB7 Homo sapiens Homeo domain factors HOX
MA1502.1 HOXB8 Homo sapiens Homeo domain factors HOX
MA1503.1 HOXB9 Homo sapiens Homeo domain factors HOX
MA1504.1 HOXC4 Homo sapiens Homeo domain factors HOX
MA1505.1 HOXC8 Homo sapiens Homeo domain factors HOX
MA1506.1 HOXD10 Homo sapiens Homeo domain factors HOX
MA1507.1 HOXD4 Homo sapiens Homeo domain factors HOX
MA1508.1 IKZF1 Homo sapiens C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
MA1509.1 IRF6 Homo sapiens Tryptophan cluster factors Interferon-regulatory factors
MA1511.1 KLF10 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1511.2 KLF10 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1512.1 KLF11 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1513.1 KLF15 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1514.1 KLF17 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1515.1 KLF2 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA1516.1 KLF3 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
Showing 25 profiles of page 76 from 98 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.