JASPAR CORE

Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0512.2 Rxra Mus musculus Nuclear receptors with C4 zinc fingers RXR-related receptors (NR2)
MA0514.1 Sox3 Mus musculus High-mobility group (HMG) domain factors SOX-related factors
MA0514.2 Sox3 Mus musculus High-mobility group (HMG) domain factors SOX-related factors
MA0515.1 Sox6 Mus musculus High-mobility group (HMG) domain factors SOX-related factors
MA0516.1 SP2 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA0516.2 SP2 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA0516.3 SP2 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA0517.1 STAT1::STAT2 Homo sapiens STAT domain factors::STAT domain factors STAT factors::STAT factors
MA0518.1 Stat4 Mus musculus STAT domain factors STAT factors
MA0519.1 Stat5a::Stat5b Mus musculus STAT domain factors::STAT domain factors STAT factors::STAT factors
Showing 10 profiles of page 73 from 243 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.