JASPAR CORE

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Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1297.1 WRKY26 Arabidopsis thaliana GCM domain factors WRKY
MA1298.1 WRKY29 Arabidopsis thaliana GCM domain factors WRKY
MA1299.1 WRKY17 Arabidopsis thaliana GCM domain factors WRKY
MA1300.1 WRKY6 Arabidopsis thaliana GCM domain factors WRKY
MA1301.1 WRKY33 Arabidopsis thaliana GCM domain factors WRKY
MA1302.1 WRKY65 Arabidopsis thaliana GCM domain factors WRKY
MA1303.1 WRKY22 Arabidopsis thaliana GCM domain factors WRKY
MA1304.1 WRKY59 Arabidopsis thaliana GCM domain factors WRKY
MA1305.1 WRKY55 Arabidopsis thaliana GCM domain factors WRKY
MA1306.1 WRKY11 Arabidopsis thaliana GCM domain factors WRKY
MA1307.1 WRKY31 Arabidopsis thaliana GCM domain factors WRKY
MA1307.2 WRKY31 Arabidopsis thaliana GCM domain factors WRKY
MA1308.1 WRKY70 Arabidopsis thaliana GCM domain factors WRKY
MA1309.1 WRKY3 Arabidopsis thaliana GCM domain factors WRKY
MA1310.1 WRKY42 Arabidopsis thaliana GCM domain factors WRKY
MA1311.1 WRKY28 Arabidopsis thaliana GCM domain factors WRKY
MA1311.2 WRKY28 Arabidopsis thaliana GCM domain factors WRKY
MA1312.1 WRKY47 Arabidopsis thaliana GCM domain factors WRKY
MA1313.1 WRKY7 Arabidopsis thaliana GCM domain factors WRKY
MA1314.1 WRKY14 Arabidopsis thaliana GCM domain factors WRKY
MA1315.1 WRKY24 Arabidopsis thaliana GCM domain factors WRKY
MA1316.1 WRKY71 Arabidopsis thaliana GCM domain factors WRKY
MA1317.1 WRKY50 Arabidopsis thaliana GCM domain factors WRKY
MA1318.1 WRKY27 Arabidopsis thaliana GCM domain factors WRKY
MA1320.1 SPL15 Arabidopsis thaliana C2H2 zinc finger factors SBP
Showing 25 profiles of page 68 from 98 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.