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Total 2430 profiles

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ID Name Species Class Family Sequence logo
MA1198.1 HAT2 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1199.1 AGL16 Arabidopsis thaliana MADS box factors MIKC
MA1201.1 AGL42 Arabidopsis thaliana MADS box factors MIKC
MA1202.1 AGL55 Arabidopsis thaliana MADS box factors M alpha
MA1203.1 AGL63 Arabidopsis thaliana MADS box factors MIKC
MA1204.1 AGL13 Arabidopsis thaliana MADS box factors MIKC
MA1205.1 AGL6 Arabidopsis thaliana MADS box factors MIKC
MA1206.1 ARF2 Arabidopsis thaliana B3 ARF
MA1207.1 GT-3a Arabidopsis thaliana Tryptophan cluster factors Trihelix
MA1208.1 GT-2 Arabidopsis thaliana Tryptophan cluster factors Trihelix
MA1209.1 ATHB-20 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1210.1 HAT22 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1210.2 HAT22 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1211.1 ATHB-X Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1212.1 ATHB-13 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1213.1 ATHB-21 Arabidopsis thaliana Homeo domain factors::Homeo domain factors HD-ZIP::PLINC
MA1213.2 ZHD3 Arabidopsis thaliana Homeo domain factors PLINC
MA1214.1 ATHB-40 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1215.1 ATHB-53 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1218.1 DREB1D Arabidopsis thaliana AP2/EREBP ERF/DREB
MA1219.1 ERF011 Arabidopsis thaliana AP2/EREBP ERF/DREB
MA1219.2 ERF011 Arabidopsis thaliana AP2/EREBP ERF/DREB
MA1220.1 TINY Arabidopsis thaliana AP2/EREBP ERF/DREB
MA1221.1 RAP2-6 Arabidopsis thaliana AP2/EREBP ERF/DREB
MA1222.1 ERF014 Arabidopsis thaliana AP2/EREBP ERF/DREB
Showing 25 profiles of page 64 from 98 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.