JASPAR CORE

Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1050.1 OsI_08196 Oryza sativa Indica Group Basic helix-loop-helix factors (bHLH) TCP
MA1051.1 RAP2-3 Arabidopsis thaliana AP2/EREBP ERF/DREB
MA1053.1 ERF109 Arabidopsis thaliana AP2/EREBP ERF/DREB
MA1054.1 ARALYDRAFT_897773 Arabidopsis lyrata subsp. lyrata Basic helix-loop-helix factors (bHLH) TCP
MA1055.1 SPL1 Arabidopsis thaliana C2H2 zinc finger factors SBP
MA1055.2 SPL1 Arabidopsis thaliana SBP
MA1056.1 SPL11 Arabidopsis thaliana C2H2 zinc finger factors SBP
MA1057.1 SPL12 Arabidopsis thaliana C2H2 zinc finger factors SBP
MA1058.1 SPL4 Arabidopsis thaliana C2H2 zinc finger factors SBP
MA1059.1 SPL5 Arabidopsis thaliana C2H2 zinc finger factors SBP
MA1059.2 SPL5 Arabidopsis thaliana C2H2 zinc finger factors SBP
MA1060.1 SPL7 Arabidopsis thaliana C2H2 zinc finger factors SBP
MA1061.1 SPT Arabidopsis thaliana Basic helix-loop-helix factors (bHLH)
MA1062.1 TCP15 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH) TCP
MA1062.2 TCP15 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH) TCP
MA1063.1 TCP19 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH) TCP
MA1064.1 TCP2 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH) TCP
MA1065.1 TCP20 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH) TCP
MA1065.2 TCP20 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH) TCP
MA1066.1 TCP23 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH) TCP
MA1067.1 TCP5 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH) TCP
MA1068.1 TGA2 Arabidopsis thaliana Basic leucine zipper factors (bZIP) Group D
MA1068.2 TGA2 Arabidopsis thaliana Basic leucine zipper factors (bZIP) Group D
MA1069.1 TGA6 Arabidopsis thaliana Basic leucine zipper factors (bZIP) Group D
MA1069.2 TGA6 Arabidopsis thaliana Basic leucine zipper factors (bZIP) Group D
Showing 25 profiles of page 57 from 98 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.