JASPAR CORE

Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0317.1 HCM1 Saccharomyces cerevisiae Fork head/winged helix factors FOX
MA0318.1 HMRA2 Saccharomyces cerevisiae Homeo domain factors TALE-type homeo domain factors
MA0319.1 HSF1 Saccharomyces cerevisiae Heat shock factors HSF factors
MA0320.1 IME1 Saccharomyces cerevisiae
MA0321.1 INO2 Saccharomyces cerevisiae Basic helix-loop-helix factors (bHLH)
MA0322.1 INO4 Saccharomyces cerevisiae Basic helix-loop-helix factors (bHLH)
MA0323.1 IXR1 Saccharomyces cerevisiae High-mobility group (HMG) domain factors
MA0324.1 LEU3 Saccharomyces cerevisiae C6 zinc cluster factors
MA0325.1 LYS14 Saccharomyces cerevisiae C6 zinc cluster factors
MA0326.1 MAC1 Saccharomyces cerevisiae Copper-fist DNA-binding domain
MA0327.1 HMRA1 Saccharomyces cerevisiae Homeo domain factors
MA0328.1 MATALPHA2 Saccharomyces cerevisiae Homeo domain factors TALE-type homeo domain factors
MA0328.2 MATALPHA2 Saccharomyces cerevisiae S288C Homeo domain factors TALE-type homeo domain factors
MA0329.1 MBP1 Saccharomyces cerevisiae APSES-type DNA-binding domain
MA0330.1 MBP1::SWI6 Saccharomyces cerevisiae APSES-type DNA-binding domain
MA0331.1 MCM1 Saccharomyces cerevisiae MADS box factors
MA0332.1 MET28 Saccharomyces cerevisiae Basic leucine zipper factors (bZIP)
MA0333.1 MET31 Saccharomyces cerevisiae C2H2 zinc finger factors
MA0334.1 MET32 Saccharomyces cerevisiae C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
MA0335.1 MET4 Saccharomyces cerevisiae Basic leucine zipper factors (bZIP)
MA0336.1 MGA1 Saccharomyces cerevisiae Heat shock factors HSF factors
MA0337.1 MIG1 Saccharomyces cerevisiae C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
MA0338.1 MIG2 Saccharomyces cerevisiae C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
MA0339.1 MIG3 Saccharomyces cerevisiae C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
MA0340.1 MOT3 Saccharomyces cerevisiae C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
Showing 25 profiles of page 20 from 98 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.