JASPAR CORE

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Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1467.1 ATOH1 Homo sapiens Basic helix-loop-helix factors (bHLH) Tal-related
MA1467.2 Atoh1 Mus musculus Basic helix-loop-helix factors (bHLH) Tal-related
MA1468.1 ATOH7 Homo sapiens Basic helix-loop-helix factors (bHLH) Tal-related
MA1470.1 BACH2 Homo sapiens Basic leucine zipper factors (bZIP) Jun-related
MA1471.1 BARX2 Homo sapiens Homeo domain factors NK
MA1472.1 BHLHA15 Homo sapiens Basic helix-loop-helix factors (bHLH) Tal-related
MA1472.2 Bhlha15 Mus musculus Basic helix-loop-helix factors (bHLH) Tal-related
MA1473.1 CDX4 Homo sapiens Homeo domain factors HOX
MA1474.1 CREB3L4 Homo sapiens Basic leucine zipper factors (bZIP) CREB-related factors
MA1475.1 CREB3L4 Homo sapiens Basic leucine zipper factors (bZIP) CREB-related factors
Showing 10 profiles of page 186 from 243 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.