JASPAR CORE

  1. Home
  2. Collection core

Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1358.1 bHLH130 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH)
MA1359.1 BPE Arabidopsis thaliana Basic helix-loop-helix factors (bHLH)
MA1359.2 BPE Arabidopsis thaliana Basic helix-loop-helix factors (bHLH)
MA1360.1 bHLH74 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH)
MA1360.2 BHLH74 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH)
MA1361.1 bHLH18 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH)
MA1362.1 bHLH77 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH)
MA1363.1 LRL2 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH)
MA1364.1 BHLH72 Arabidopsis thaliana Basic helix-loop-helix factors (bHLH)
MA1365.1 AT5G47660 Arabidopsis thaliana Tryptophan cluster factors Trihelix
Showing 10 profiles of page 175 from 243 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.