JASPAR CORE

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Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1272.2 DOF2.2 Arabidopsis thaliana Other C4 zinc finger-type factors DOF
MA1273.1 DOF4.2 Arabidopsis thaliana Other C4 zinc finger-type factors DOF
MA1274.1 DOF3.6 Arabidopsis thaliana Other C4 zinc finger-type factors DOF
MA1275.1 DOF1.6 Arabidopsis thaliana Other C4 zinc finger-type factors DOF
MA1276.1 DOF3.5 Arabidopsis thaliana Other C4 zinc finger-type factors DOF
MA1277.1 DOF1.7 Arabidopsis thaliana Other C4 zinc finger-type factors DOF
MA1278.1 DOF3.4 Arabidopsis thaliana Other C4 zinc finger-type factors DOF
MA1279.1 DOF1.5 Arabidopsis thaliana Other C4 zinc finger-type factors DOF
MA1280.1 DOF5.4 Arabidopsis thaliana Other C4 zinc finger-type factors DOF
MA1281.1 DOF5.1 Arabidopsis thaliana Other C4 zinc finger-type factors DOF
Showing 10 profiles of page 166 from 243 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.