JASPAR CORE

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Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1174.1 MYB56 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1175.1 MYB81 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1176.1 MYB119 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1177.1 MYB65 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1178.1 MYB3R1 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1178.2 MYB3R1 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1179.1 MYB1 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1180.1 MYB3R4 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1181.1 MYB113 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1182.1 RVE8 Arabidopsis thaliana Tryptophan cluster factors Myb-related
Showing 10 profiles of page 156 from 243 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.