JASPAR CORE

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Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0818.1 BHLHE22 Homo sapiens Basic helix-loop-helix factors (bHLH) Tal-related
MA0818.2 BHLHE22 Homo sapiens Basic helix-loop-helix factors (bHLH) Tal-related
MA0819.1 CLOCK Homo sapiens Basic helix-loop-helix factors (bHLH) PAS domain factors
MA0819.2 CLOCK Homo sapiens Basic helix-loop-helix factors (bHLH) PAS domain factors
MA0820.1 FIGLA Homo sapiens Basic helix-loop-helix factors (bHLH) Tal-related
MA0821.1 HES5 Homo sapiens Basic helix-loop-helix factors (bHLH) Hairy-related factors
MA0821.2 HES5 Homo sapiens Basic helix-loop-helix factors (bHLH) Hairy-related factors
MA0822.1 HES7 Homo sapiens Basic helix-loop-helix factors (bHLH) Hairy-related factors
MA0823.1 HEY1 Homo sapiens Basic helix-loop-helix factors (bHLH) Hairy-related factors
MA0825.1 MNT Homo sapiens Basic helix-loop-helix factors (bHLH) bHLH-ZIP
Showing 10 profiles of page 113 from 243 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

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Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.