JASPAR CORE

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Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0755.1 CUX2 Homo sapiens Homeo domain factors HD-CUT
MA0756.1 ONECUT2 Homo sapiens Homeo domain factors HD-CUT
MA0756.2 ONECUT2 Homo sapiens Homeo domain factors HD-CUT
MA0757.1 ONECUT3 Homo sapiens Homeo domain factors HD-CUT
MA0758.1 E2F7 Homo sapiens Fork head/winged helix factors E2F
MA0759.1 ELK3 Homo sapiens Tryptophan cluster factors Ets-related
MA0759.2 ELK3 Homo sapiens Tryptophan cluster factors Ets-related
MA0760.1 ERF Homo sapiens Tryptophan cluster factors Ets-related
MA0761.1 ETV1 Homo sapiens Tryptophan cluster factors Ets-related
MA0761.2 ETV1 Homo sapiens Tryptophan cluster factors Ets-related
Showing 10 profiles of page 105 from 243 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.