JASPAR Collection UNVALIDATED

  1. Home
  2. Collection UNVALIDATED

Total 551 profiles

These profiles are regarded as unvalidated because our curators failed to find any orthogonal support from existing literature. We encourage the community to perform experiments and/or point us to literature that our curators missed in order to support these profiles.
Display profiles
ID Name Species Class Family Sequence logo
UN0548.1 GCM1::ONECUT2 Homo sapiens GCM domain factors::Homeo domain factors GCM::HD-CUT
UN0549.1 GCM1::SOX2 Homo sapiens GCM domain factors::High-mobility group (HMG) domain factors GCM::SOX-related factors
UN0550.1 GCM1::TBX21 Homo sapiens GCM domain factors::T-Box factors GCM::TBrain-related factors
UN0551.1 GCM2::DRGX Homo sapiens GCM domain factors::Paired-related HD factors GCM::Paired-related HD factors
UN0552.1 GCM2::ELK1 Homo sapiens GCM domain factors::Tryptophan cluster factors GCM::Ets-related
UN0553.1 GCM2::HOXA13 Homo sapiens GCM domain factors::Homeo domain factors GCM::HOX
UN0554.1 GCM2::PITX1 Homo sapiens GCM domain factors::Homeo domain factors GCM::Paired-related HD factors
UN0555.1 GCM2::TBX21 Homo sapiens GCM domain factors::T-Box factors GCM::TBrain-related factors
UN0556.1 GLI4 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
UN0557.1 HKR1 Homo sapiens C2H2 zinc finger factors More than 3 adjacent zinc fingers
Showing 10 profiles of page 42 from 56 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.

Add to cart

You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.
View cart

Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.