JASPAR CORE

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Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0469.2 E2F3 Homo sapiens Fork head/winged helix factors E2F
MA0469.3 E2F3 Homo sapiens Fork head/winged helix factors E2F
MA0470.1 E2F4 Homo sapiens Fork head/winged helix factors E2F
MA0470.2 E2F4 Homo sapiens Fork head/winged helix factors E2F
MA0471.1 E2F6 Homo sapiens Fork head/winged helix factors E2F
MA0471.2 E2F6 Homo sapiens Fork head/winged helix factors E2F
MA0472.1 Egr2 Mus musculus C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA0472.2 EGR2 Homo sapiens C2H2 zinc finger factors Three-zinc finger Kruppel-related
MA0473.1 ELF1 Homo sapiens Tryptophan cluster factors Ets-related
MA0473.2 ELF1 Homo sapiens Tryptophan cluster factors Ets-related
Showing 10 profiles of page 65 from 243 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.