JASPAR CORE

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Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0284.1 CIN5 Saccharomyces cerevisiae Basic leucine zipper factors (bZIP)
MA0284.2 CIN5 Saccharomyces cerevisiae Basic leucine zipper factors (bZIP)
MA0285.1 CRZ1 Saccharomyces cerevisiae C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
MA0286.1 CST6 Saccharomyces cerevisiae Basic leucine zipper factors (bZIP)
MA0287.1 CUP2 Saccharomyces cerevisiae Copper-fist DNA-binding domain
MA0288.1 CUP9 Saccharomyces cerevisiae Homeo domain factors TALE-type homeo domain factors
MA0289.1 DAL80 Saccharomyces cerevisiae Other C4 zinc finger-type factors C4-GATA-related
MA0290.1 DAL81 Saccharomyces cerevisiae C6 zinc cluster factors
MA0291.1 DAL82 Saccharomyces cerevisiae
MA0292.1 ECM22 Saccharomyces cerevisiae C6 zinc cluster factors
Showing 10 profiles of page 45 from 243 pages

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Scan

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)
Relative profile score threshold %

Cluster

Cluster selected models using STAMP tool.



You can use the Newick tree from results to visualize on PhyloTree

Randomize

Create random matrix models based on selected models.

Permute

Create models with permuted columns from selected models.

Download

Download the PFMs of the model(s) selected in four different formats.