JASPAR CORE

Total 2430 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA1365.2 AT5G47660 Arabidopsis thaliana Tryptophan cluster factors Trihelix
MA1366.1 DF1 Arabidopsis thaliana Tryptophan cluster factors Trihelix
MA1367.1 AT1G76870 Arabidopsis thaliana Tryptophan cluster factors Trihelix
MA1368.1 GT-4 Arabidopsis thaliana Tryptophan cluster factors Trihelix
MA1368.2 GT-4 Arabidopsis thaliana Tryptophan cluster factors Trihelix
MA1369.1 HDG1 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1370.1 IDD5 Arabidopsis thaliana C2H2 zinc finger factors
MA1371.1 IDD4 Arabidopsis thaliana C2H2 zinc finger factors
MA1372.1 ZAT10 Arabidopsis thaliana C2H2 zinc finger factors
MA1373.1 GAF1 Arabidopsis thaliana C2H2 zinc finger factors
MA1374.1 IDD7 Arabidopsis thaliana C2H2 zinc finger factors
MA1375.1 ANL2 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1376.1 DEAR3 Arabidopsis thaliana AP2/EREBP ERF/DREB
MA1377.1 PLT1 Arabidopsis thaliana AP2/EREBP AP2
MA1378.1 AIL6 Arabidopsis thaliana AP2/EREBP AP2
MA1379.1 SOL1 Arabidopsis thaliana CPP
MA1380.1 TCX6 Arabidopsis thaliana CPP
MA1381.1 AT3G46070 Arabidopsis thaliana C2H2 zinc finger factors
MA1382.1 FAR1 Arabidopsis thaliana GCM domain factors WRKY-like_FRS/FRF
MA1383.1 KAN2 Arabidopsis thaliana Tryptophan cluster factors GARP_G2-like
MA1384.1 PHL7 Arabidopsis thaliana Tryptophan cluster factors GARP_G2-like
MA1385.1 AT2G40260 Arabidopsis thaliana Tryptophan cluster factors GARP_G2-like
MA1386.1 HHO3 Arabidopsis thaliana Tryptophan cluster factors GARP_G2-like
MA1386.2 HHO3 Arabidopsis thaliana Tryptophan cluster factors GARP_G2-like
MA1387.1 HRS1 Arabidopsis thaliana Tryptophan cluster factors GARP_G2-like
MA1388.1 PHL2 Arabidopsis thaliana Tryptophan cluster factors GARP_G2-like
MA1389.1 PHL1 Arabidopsis thaliana Tryptophan cluster factors GARP_G2-like
MA1390.1 HHO2 Arabidopsis thaliana Tryptophan cluster factors GARP_G2-like
MA1390.2 HHO2 Arabidopsis thaliana Tryptophan cluster factors GARP_G2-like
MA1391.1 MYB33 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1391.2 MYB33 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1392.1 MYB98 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1392.2 MYB98 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1393.1 MYB70 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1393.2 MYB70 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1394.1 MYB73 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1394.2 MYB73 Arabidopsis thaliana Tryptophan cluster factors Myb
MA1396.1 GATA6 Arabidopsis thaliana Other C4 zinc finger-type factors C4-GATA-related
MA1397.1 AT1G74840 Arabidopsis thaliana Tryptophan cluster factors Myb-related
MA1398.1 KUA1 Arabidopsis thaliana Tryptophan cluster factors Myb-related
MA1398.2 KUA1 Arabidopsis thaliana Tryptophan cluster factors Myb-related
MA1400.1 AT1G19000 Arabidopsis thaliana Tryptophan cluster factors Myb-related
MA1401.1 RVE7 Arabidopsis thaliana Tryptophan cluster factors Myb-related
MA1402.1 BPC6 Arabidopsis thaliana BBR/BPC
MA1403.1 BPC5 Arabidopsis thaliana BBR/BPC
MA1404.1 BPC1 Arabidopsis thaliana BBR/BPC
MA1405.1 SIZF2 Solanum lycopersicum C2H2 zinc finger factors
MA1406.1 ATHB-4 Arabidopsis thaliana Homeo domain factors HD-ZIP
MA1407.1 bZIP14 Phaeodactylum tricornutum Basic leucine zipper factors (bZIP) Group A
MA1408.1 FaEOBII Fragaria x ananassa Tryptophan cluster factors Myb-related
Showing 50 profiles of page 36 from 49 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.